BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C01LP1|AL429868
(847 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig996 1652 0.0
>3x_Contig996
Length = 2590
Score = 1652 bits (832), Expect = 0.0
Identities = 842/847 (99%)
Strand = Plus / Minus
Query: 1 ccttgaaagaccttcgtagcttcgcgntgttcggagatgcattttgtgttgtgagtgggg 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 1843 ccttgaaagaccttcgtagcttcgcggtgttcggagatgcattttgtgttgtgagtaggg 1784
Query: 61 caggctgaagttgtgaatctagagaatctgtggctgaaactggggttttcaatttttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1783 caggctgaagttgtgaatctagagaatctgtggctgaaactggggttttcaatttttgag 1724
Query: 121 attgagatttccgtagagaggggaactggccaagatgagtttgaggagcatcatgaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1723 attgagatttccgtagagaggggaactggccaagatgagtttgaggagcatcatgaacct 1664
Query: 181 ccataatggaatagctacctctttcatcttcgctatctataacaatttcgttattatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1663 ccataatggaatagctacctctttcatcttcgctatctataacaatttcgttattatcat 1604
Query: 241 catgcaacatagaagtagttaaagtagacaaactttcttgctcttgcgtatctacctccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1603 catgcaacatagaagtagttaaagtagacaaactttcttgctcttgcgtatctacctccc 1544
Query: 301 ccttaacactggcgaaaacgtcattagagtccctattgctatcaacatatatcttgacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1543 ccttaacactggcgaaaacgtcattagagtccctattgctatcaacatatatcttgacga 1484
Query: 361 cattagcaggttttgaagcttgttgctgattctgttgttgttggtcttgaaaggtagtag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1483 cattagcaggttttgaagcttgttgctgattctgttgttgttggtcttgaaaggtagtag 1424
Query: 421 ttctcgttgcgggcacctgaatagtcccggttctttgggccttcattggagatacgatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 ttctcgttgcgggcacctgaatagtcccggttctttgggccttcattggagatacgatgg 1364
Query: 481 aggacactacatcgtaagacgtttgtgatatgtttatcagttgatcgtttatgtttgccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 aggacactacatcgtaagacgtttgtgatatgtttatcagttgatcgtttatgtttgccc 1304
Query: 541 tggaatattcccttttcgttttctcaccagtgggtaaagtcttggaatctggtggtaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 tggaatattcccttttcgttttctcaccagtgggtaaagtcttggaatctggtggtaaat 1244
Query: 601 agcatggtatatcgtaatcgacgtctgccttgttcttgtcttgaatcatgaaactcagct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 agcatggtatatcgtaatcgacgtctgccttgttcttgtcttgaatcatgaaactcagct 1184
Query: 661 cttcaaagctaatgatagacccgctatcgcatgaatcggctatctgagacggtacatccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 cttcaaagctaatgatagacccgctatcgcatgaatcggctatctgagacggtacatccg 1124
Query: 721 tctcagacgamggcacgtctatgctamttggtagttcctgttcgatgacagagcttgggt 780
||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1123 tctcagatgaaggcacgtctatgctaattggtagttcctgttcgatgacagagcttgggt 1064
Query: 781 tcgagatcggtttgaacctcaatccatcttccgttgagcaccggttattactgctttctc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 tcgagatcggtttgaacctcaatccatcttccgttgagcaccggttattactgctttctc 1004
Query: 841 cttcgac 847
|||||||
Sbjct: 1003 cttcgac 997
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5848
Number of Sequences: 1807
Number of extensions: 5848
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 847
length of database: 10,358,551
effective HSP length: 16
effective length of query: 831
effective length of database: 10,329,639
effective search space: 8583930009
effective search space used: 8583930009
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)